STAD  Firebrowse (January 28, 2016)


Dataset at a glance

No. Samples393
No. mutated genes17818
No. SNVs135657
No. CNAs2335

Most Mutated Genes


Gene
Mutated
Samples

SNVs
Inactivating
SNVs

CNAs
View MutationsView Annotations
TTN21521500>>>>
TP53187187630>>>>
ARID1A141998547>>>>
MUC16132132190>>>>
LRP1B104104320>>>>
SYNE19999220>>>>
CSMD197821122>>>>
ERBB29319176>>>>
CSMD39393100>>>>
OBSCN9090100>>>>
FAT4858580>>>>
FLG8585130>>>>
PCLO8080200>>>>
MYC786272>>>>
RYR27777180>>>>
FAT37373100>>>>
PARK27113260>>>>
CDKN2A7116656>>>>
HMCN17070240>>>>
DNAH57070150>>>>
KRAS7037036>>>>
SPTA16969120>>>>
SMAD46928449>>>>
ZFHX46868260>>>>
KMT2D6767390>>>>
PIK3CA656510>>>>
PTEN63302241>>>>
CCNE1625057>>>>
HSPG2626290>>>>
ATM60381926>>>>
PCDH15595980>>>>
USH2A595960>>>>
DNAH115959210>>>>
AHNAK2585870>>>>
RYR3585880>>>>
CUBN5656190>>>>
SACS5656160>>>>
ZNF2175513244>>>>
ARNT558447>>>>
CARD115524431>>>>
PLEC555570>>>>
DNAH9545460>>>>
GPR985353140>>>>
DMD535380>>>>
LRRK25353100>>>>
PBRM153241633>>>>
COL12A15353160>>>>
PARD3B5318535>>>>
ITGAV5218837>>>>
XIRP2525290>>>>
KMT2C5252280>>>>
DNAH75151140>>>>
C6orf223510051>>>>
GLI3505070>>>>
MUC5B505090>>>>
RYR15050100>>>>
VPS13B4949190>>>>
LAMA1494960>>>>
APC4848260>>>>
MCL1482047>>>>
CDK6483045>>>>
TRRAP484870>>>>
ERBB4484850>>>>
PCDH10484840>>>>
NBEA4848140>>>>
SYNE24848160>>>>
APOB474760>>>>
NEB4747110>>>>
CIC4747160>>>>
RNF2134747100>>>>
LRP24747120>>>>
ANK34747150>>>>
SDK1464670>>>>
CSMD2464660>>>>
FAT2464690>>>>
TG464660>>>>
DNAH3464680>>>>
PXDN464660>>>>
CCND1462044>>>>
MUC64646200>>>>
HERC24545100>>>>
KMT2B4545360>>>>
CACNA1E454570>>>>
RNF434545440>>>>
MUC17454510>>>>
MDN14545140>>>>
KIAA11094444200>>>>
NAV34444110>>>>
CMYA54444100>>>>
DNAH84444120>>>>
TERT449136>>>>
PLXNA4444430>>>>
DNAH104444100>>>>
PREX2444460>>>>
PTPRT4343100>>>>
LINC00290430043>>>>
PMS2436237>>>>
RIMS24343120>>>>
NRXN1424250>>>>
NALCN424290>>>>

Mutations plot


Most Mutated Pathways

Gene SetNo. GenesDatabaseMutated Samples SNVsInactivating SNVsCNAsTop 5 Genes
Pathways in cancer - Homo sapiens (human)329KEGG3823329804693View
Melanoma - Homo sapiens (human)71KEGG363824198270View
Endometrial cancer - Homo sapiens (human)52KEGG362860233317View
Pancreatic cancer - Homo sapiens (human)72KEGG361852201328View
MAPK signaling pathway - Homo sapiens (human)269KEGG3592199518212View
Focal adhesion - Homo sapiens (human)199KEGG3592444511220View
Chronic myeloid leukemia - Homo sapiens (human)75KEGG358839208373View
Colorectal cancer - Homo sapiens (human)84KEGG3571089293223View
Cell cycle - Homo sapiens (human)125KEGG3511043297370View
Regulation of actin cytoskeleton - Homo sapiens (human)213KEGG3501924386183View
Small cell lung cancer - Homo sapiens (human)86KEGG3501158297317View
Glioma - Homo sapiens (human)65KEGG348814184270View
Non-small cell lung cancer - Homo sapiens (human)54KEGG348715152305View
Bladder cancer - Homo sapiens (human)42KEGG347547137342View
Wnt signaling pathway - Homo sapiens (human)150KEGG3461444363165View
Prostate cancer - Homo sapiens (human)89KEGG3461022231353View
Calcium signaling pathway - Homo sapiens (human)177KEGG3402046352151View
p53 signaling pathway - Homo sapiens (human)68KEGG331551173269View
Olfactory transduction - Homo sapiens (human)389KEGG33123063170View
Neurotrophin signaling pathway - Homo sapiens (human)126KEGG330114925862View